Hosted Tools

 

JustBio offers you free Online tools 

DNA/RNA

Cleaner



With this tool you can simply and quickly clean your sequences from unwanted text marks and spaces. This is useful after retrieving sequences from online databases for example.

Translator



With this tool you can translateyour DNA sequences from 1 to 6 phases in formated outputs. Very clean.

NetPlasmid



With this simple tool, you can draw colored plasmid maps in a few minutes from your browser!

ORF Viewer



With this simple tool, you can find quickly ORF regions on your DNA sequence. You get a graphical output on the 6 phases (direct and reverse orientations).

Batch Codon Usage



With this simple tool, you can find quickly ORF codon usage and %GC from one or more sequences.

Aligner



With this tool you can align easily your multiple sequences DNA or protein, based on a Clustalw engine.

Cutter



With this tool you can quicky get the list of all enzyme restriction sites on your sequence.

Complementor



With this tool you can quicky get the complementary (reversed or not) of your DNA sequence.

EnzFinder



With this tool you can search for commercial data about any Enzyme: availability, cut sequence, references, etc.

OligoCalc



With this tool you can simply and quickly calculate your primer parameters (Tm, %GC, ...)

Primer3



With this tool you can pick primers from a DNA sequence. This is a very complete tool which may be of complex usage...

PrimerAnneal



With this tool you can search and visualize quickly where your primers will hybridize on your DNA template sequence. Uses degenerate code also and searchs in direct and reversed direction at once...

Protein

Cleaner



With this tool you can simply and quickly clean your sequences from unwanted text marks and spaces. This is useful after retrieving sequences from online databases for example.

Aligner



With this tool you can align easily your multiple sequences DNA or protein, based on a Clustalw engine.

PatSearch



Search PROSITE patterns on your protein sequence

Plot Anaysis



Generate hydropathy & Antigenic plots (Kyte-Doolittle and Hopp-Woods)

SeqPainter



Color your amino-acids sequence according to their properties (default by hydrophobicity).

ProtCalc



With this tool you can simply and quickly determine statistical, theoretical MW, pI and extinction data from your protein sequence.





Arrays

Arrays



Several tools to batch process and analyse array genomic data. It can be used also for lists of values to treat.





Bibilographic tools

TOC Search



A great search engine to search in current Table of Contents for papers that have been just published and related to your keywords. You get cross results in a single search!

Medline Search...



A simple Medline search engine...

Database Search and Tools

PatSearch



Search PROSITE patterns on your protein sequence.

PromoterDB



Search for a promoter sequence by keyword in our database (vertebrates and non-vertebrates).

WormsDB



Search worms species from the Felix Lab database.

 

 

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PubMed New and Noteworthy

http://pubmed.gov/

PubMed Health Systematic Reviews


- Thu, 20 Feb 2014 11:00:00 EST

PubMed Commons


- Thu, 19 Dec 2013 12:00:00 EST

MeSH updated


- Mon, 16 Dec 2013 11:30:00 EST

Multiple author affiliations


- Mon, 16 Dec 2013 11:00:00 EST

Relevance Sort


- Tue, 22 Oct 2013 11:00:00 EST

My NCBI Curriculum Vitae application released, SciENcv


- Tue, 17 Sep 2013 10:00:00 EST

NLM Catalog filters sidebar replaces the Limits page


- Thu, 06 Jun 2013 13:00:00 EST

My Bibliography: Public Access Compliance video


- Fri, 26 Apr 2013 12:00:00 EST

My NCBI Saved Search enhanced


- Wed, 17 Apr 2013 13:00:00 EST

MeSH Database YouTube tutorial


- Thu, 14 Feb 2013 10:00:00 EST

Non-English Abstracts


- Wed, 13 Feb 2013 12:00:00 EST

Download history and search bar updates


- Wed, 06 Feb 2013 14:00:00 EST

Author Keyword


- Wed, 06 Feb 2013 14:00:00 EST

Filter sidebar default selections updated


- Mon, 10 Dec 2012 13:00:00 EST

MeSH updated


- Mon, 10 Dec 2012 13:00:00 EST

My Bibliography enhanced


- Fri, 13 Jul 2012 10:00:00 EST

Discovery tools


- Mon, 18 Jun 2012 12:00:00 EST

Filters sidebar replaces the Limits page


- Thu, 10 May 2012 15:00:00 EST

Computed author sorted display


- Thu, 10 May 2012 15:00:00 EST

Filters sidebar tutorial


- Thu, 10 May 2012 15:00:00 EST

Biology News Net - Bioinformatics

http://www.biologynews.net/

International team sequences rainbow trout genome


- Tue, 22 Apr 2014 17:58:15 -0500

Bioinformatics profiling identifies a new mammalian clock gene


- Tue, 22 Apr 2014 17:58:14 -0500

Splice variants reveal connections among autism genes


- Fri, 11 Apr 2014 19:52:53 -0500

Research from CHORI scientists demonstrates first genome methylation in fruit fly


- Thu, 27 Mar 2014 17:47:42 -0500

Loblolly pine genome is largest ever sequenced


- Thu, 20 Mar 2014 18:55:22 -0500

Genome-wide association studies mislead on cardiac arrhythmia risk gene


- Thu, 20 Mar 2014 18:55:20 -0500

Ancient DNA shows moa were fine until humans arrived


- Wed, 19 Mar 2014 20:10:08 -0500

Sea anemone is genetically half animal, half plant


- Tue, 18 Mar 2014 19:04:10 -0500

Single gene separates queen from workers


- Wed, 29 Jan 2014 20:26:48 -0500

Study expands the cancer genomics universe


- Fri, 24 Jan 2014 17:22:26 -0500

Biology News Net - Biotechnology

http://www.biologynews.net/

Nanoparticles cause cancer cells to self-destruct


- Thu, 03 Apr 2014 15:57:39 -0500

Nano-paper filter removes viruses


- Mon, 31 Mar 2014 17:12:04 -0500

Engineered bacteria produce biofuel alternative for high-energy rocket fuel


- Wed, 26 Mar 2014 17:57:53 -0500

New technique for identifying gene-enhancers


- Mon, 24 Mar 2014 21:25:44 -0500

Fast synthesis could boost drug development


- Wed, 19 Mar 2014 20:10:09 -0500

Scientists 'herd' cells in new approach to tissue engineering


- Tue, 11 Mar 2014 17:36:01 -0500

Gene transfer optimization


- Tue, 04 Mar 2014 15:50:47 -0500

Researchers X-ray living cancer cells


- Thu, 27 Feb 2014 17:54:16 -0500

3D microgels 'on-demand' offer new potential for cell research


- Wed, 26 Feb 2014 18:37:00 -0500

Photopharmacology: Optoswitches turn pain off and sight on


- Wed, 26 Feb 2014 18:36:59 -0500